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Showing posts with the label H5py

Array Slicing Raises Indexerror: Too Many Indices For Array

I have some data (from an HDF5 file) which I want to get only some columns. I tried slicing the arr… Read more Array Slicing Raises Indexerror: Too Many Indices For Array

Adding New Data Into Hdf5 File Results An Empty Array

While playing with HDF5 package for Python I discovered a strange behavior. I want to insert more d… Read more Adding New Data Into Hdf5 File Results An Empty Array

Read Matlab V7.3 File Into Python List Of Numpy Arrays Via H5py

I know this has been asked before but in my opinion there are still no answers that explain what is… Read more Read Matlab V7.3 File Into Python List Of Numpy Arrays Via H5py

H5py: Compound Datatypes And Scale-offset In The Compression Pipeline

Using Numpy and h5py, it is possible to create ‘compound datatype’ datasets to be stored in an hdf5… Read more H5py: Compound Datatypes And Scale-offset In The Compression Pipeline

Adding Data To Existing H5py File Along New Axis Using H5py

I have some sample code that generates a 3d Numpy array -- I am then saving this data into a h5py f… Read more Adding Data To Existing H5py File Along New Axis Using H5py

How To Save H5py Arrays With Different Sizes?

I am referring this question to this. I am making this new thread because I did not really understa… Read more How To Save H5py Arrays With Different Sizes?

Getting Multiple Datasets From Group In Hdf5

I am comparing two different hdf5 files to make sure that they match. I want to create a list with … Read more Getting Multiple Datasets From Group In Hdf5

Read H5 File Using Aws S3 S3fs/boto3

I am trying to read h5 file from AWS S3. I am getting the following errors using s3fs/boto3. Can yo… Read more Read H5 File Using Aws S3 S3fs/boto3

Python H5py: Can I Store A Dataset Which Different Columns Have Different Types?

Suppose I have a table which has many columns, only a few columns is float type, others are small i… Read more Python H5py: Can I Store A Dataset Which Different Columns Have Different Types?

How Can I Solve This 3d Regular Grid Interpolation Problem

I am a new python user. I have a h5 file, which is a snapshot of gravitational potential at a fixed… Read more How Can I Solve This 3d Regular Grid Interpolation Problem

Inserting Many Hdf5 Datasets Very Slow

There is a dramatic slowdown when inserting many datasets into a group. I have found that the slowd… Read more Inserting Many Hdf5 Datasets Very Slow

Opening A Mat File Using H5py And Convert Data Into A Numpy Matrix

I have a mat file which contains 2 different cells containing matrices of different size. I need to… Read more Opening A Mat File Using H5py And Convert Data Into A Numpy Matrix

I Want To Convert Very Large Csv Data To Hdf5 In Python

I have a very large csv data. It looks like this. [Date, Firm name, value 1, value 2, ..., value 60… Read more I Want To Convert Very Large Csv Data To Hdf5 In Python

How To Compress The Data That Saved In Hdf5?

I am using python 2.7 to read a video and store in hdf5. This is my code import h5py import skvideo… Read more How To Compress The Data That Saved In Hdf5?

H5py.File(path) Doesn't Recognize Folder Path

I am in my project folder call 'project'. I have two neural network h5 file, one in 'pr… Read more H5py.File(path) Doesn't Recognize Folder Path